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- Proteins & Proteomes
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- Software tool
OMArk
OMArk determines the quality and completeness of gene sets
ESTscan
- Genes & Genomes
- Software tool
ESTScan can detect coding regions (CDS) in DNA sequences, even if they are of low quality. It also detects/corrects sequencing errors that lead to frameshifts. ESTScan is not a gene prediction program , nor is it an open reading frame detector. In fact, its strength lies in the fact that it does not require an open reading frame to detect a coding region. The program may miss a few translated amino acids at termini, but detects coding regions with high selectivity and sensitivity.
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QMEAN
Protein model quality estimation-
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CAMEO
Weekly automated benchmarking of protein structure modelling-
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BUSCO
From QC to gene prediction and phylogenomics-
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LEMMI
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Swiss-Trees
A collection of gold standard gene phylogenies-