Variomes

  • Text mining & Machine learning
  • Software tool
Variomes is a curation-support tool for personalized medicine, enabling to perform triage of publications (MEDLINE citations, PMC full texts and clinical trials) relevant to support an evidence-based decision. The system is also able to prioritize variants (e.g. from a Variant Calling File) to facilitate the identification of clinically actionable variants. Variomes is freely accessible via a GUI or a set of APIs.

You might also be interested in

      • Text mining & Machine learning
      • Database
      • Software tool

    SIBiLS

    Personalized information retrieval from the literature
      • Proteins & Proteomes
      • Database

    EnzChemRED

    Enzyme Chemistry Relation Extraction Dataset
      • Proteins & Proteomes
      • Database

    UniProtKB

    Protein sequence database
      • Transcriptomics
      • , Genomics
      • Database

    Glittr

    Git repositories with bioinformatics training material
      • Systems Biology
      • Database

    Cellosaurus

    Knowledge resource on cell lines
      • Genomics
      • Systems Biology
      • Database
      • Software tool

    arrayMAP

    Curated array data repository for cancer genomics
      • Genomics
      • , Genes & Genomes
      • Database
      • Software tool

    SVIP

    Clinical interpretation of variants in cancer
      • Systems Biology
      • Genes & Genomes
      • , Genomics
      • Database
      • Software tool

    Progenetix

    Genomic profiles of cancer samples with focus on CNV
      • Genes & Genomes
      • , Genomics
      • Text mining & Machine learning
      • Database

    cancercelllines.org

    Genomic variants in human cancer cell lines