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- Genes & Genomes
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- Proteins & Proteomes
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- Structural Biology
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- Database
ViralZone
Fact sheets about viruses linked to sequence databases
UniProt SPARQL endpoint
- Proteins & Proteomes
- Database
Use SPARQL to express queries across diverse data sources, such as UniProt and its supporting datasets as well as other databases that provide this technology. This allows powerful queries as if the queried databases were installed locally.
You might also be interested in
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- Evolution & Phylogeny
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- Database
OrthoDB
Ortholog evolutionary and functional annotations-
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- Proteins & Proteomes
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- Database
UniProtKB/Swiss-Prot
Protein knowledgebase-
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- Proteins & Proteomes
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- Database
UniProtKB
Protein sequence database-
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- Proteins & Proteomes
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- Software tool
HAMAP-Scan
Scanning of protein sequences against HAMAP families-
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- Proteins & Proteomes
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- Database
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- Software tool
HAMAP
UniProtKB family classification and annotation-
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- Genomics
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- Database
TASmania
Toxin-antitoxin database-
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- Genomics
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- Software tool
TASer
Search tool associated to TASmania-
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- Evolution & Phylogeny
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- Database
OrthoDB SPARQL endpoint
SPARQL access to the OrthoDB catalog of orthologs-
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- Proteins & Proteomes
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- Database
HAMAP SPARQL endpoint
SPARQL access to the HAMAP annotation rules-
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- Proteins & Proteomes
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- Software tool
ScanProsite
Protein sequences against PROSITE-
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- Evolution & Phylogeny
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- Software tool
OrthoLoger
Accurate and scalable inference of groups of orthologs-
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- Evolution & Phylogeny
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- Database
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- Software tool
OMA
Orthology inference among complete genomes-
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- Proteins & Proteomes
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- Systems Biology
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- Database
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- Software tool
STRING
Protein-protein interaction networks and enrichment analysis-
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- Glycomics
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- Software tool
Glydin'
Network representation of known glycan determinants-
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- Glycomics
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- Software tool
EpitopeXtractor
Compare glycan structures to Glydin' network's collection-
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- Proteins & Proteomes
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- Lipidomics
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- Database
SwissLipids
Knowledge resource for lipids-
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- Proteins & Proteomes
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- Systems Biology
- , Metabolomics
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- Database
Rhea
Expert-curated database of biochemical reactions-
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- Proteins & Proteomes
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- Database
ENZYME
Enzyme nomenclature database-
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- Proteins & Proteomes
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- Systems Biology
- , Metabolomics
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- Database
Rhea SPARQL endpoint
SPARQL access to the Rhea knowledgebase-
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- Systems Biology
- , Glycomics
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- Software tool
HMO-Glycologue
Simulator of Human Milk Oligosaccharide synthesis-
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- Proteins & Proteomes
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- Lipidomics
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- Database
SwissLipids SPARQL endpoint
SPARQL access to the SwissLipids knowledgebase-
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- Proteins & Proteomes
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- Systems Biology
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- Database
STRING SPARQL endpoint
SPARQL access to the STRING knowledgebase-
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- Systems Biology
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- Software tool
OMAMO
OMAMO allows the user to find the best simple model organism-
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- Text mining & Machine learning
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- Software tool
Variomes
Search engine to support the curation of genomic variants-
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- Genomics
- , Transcriptomics
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- Database
Glittr
Git repositories with bioinformatics training material-
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- Systems Biology
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- Database
Cellosaurus
Knowledge resource on cell lines-
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- Proteins & Proteomes
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- Glycomics
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- Software tool
GlycoSiteAlign
Multiple alignment of sequences around glycosylation sites-
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- Proteins & Proteomes
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- Glycomics
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- Database
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- Software tool
GlyConnect
Integrated data platform to study glycosylation-
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- Proteins & Proteomes
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- Software tool
PRATT
Conserved patterns in a set of protein sequences-
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- Proteins & Proteomes
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- Database
PROSITE
Protein family and domain database-
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- Proteins & Proteomes
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- Glycomics
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- Database
GlyConnect SPARQL endpoint
SPARQL access to GlyConnect-
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- Proteins & Proteomes
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- Text mining & Machine learning
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- Database
MHC Motif Atlas
MHC Motif Atlas-