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- Glycomics
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- Database
UniCarb-DB
Glycan structures and associated mass spectrometry data
GlyConnect SPARQL endpoint
- Proteins & Proteomes
- Glycomics
- Database
SPARQL access to GlyConnect, a platform integrating several sources of information to characterise the molecular actors of glycosylation, mainly glycoproteins and N- and O-linked glycans. The purpose of GlyConnect is to bring out in a single resource the relationships between glycans, the proteins that carry them, the enzymes that synthesise or degrade them and the proteins that bind them.
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- Proteins & Proteomes
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- Glycomics
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- Software tool
Swiss Mass Abacus
Intuitive calculator of peptide and glycopeptide masses-
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- Glycomics
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- Software tool
SugarSketcher
Fast, intuitive, SNFG-compliant glycan structure drawing-
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- Glycomics
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- Database
SugarBind
Pathogen Sugar-Binding Database-
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- Glycomics
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- Software tool
GlyS3
Match a glycan substructure to a database of full structures-
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- Glycomics
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- Software tool
Glynsight
Visualise and compare glycan expression profiles-
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- Glycomics
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- Software tool
Glydin'
Network representation of known glycan determinants-
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- Proteins & Proteomes
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- Glycomics
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- Software tool
GlycoSiteAlign
Multiple alignment of sequences around glycosylation sites-
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- Proteins & Proteomes
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- Glycomics
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- Database
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- Software tool
GlyConnect
Integrated data platform to study glycosylation-
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- Glycomics
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- Software tool
GlycoDigest
In silico digestion of glycans by exoglycosidases-
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- Glycomics
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- Software tool
EpitopeXtractor
Compare glycan structures to Glydin' network's collection-
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- Proteins & Proteomes
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- Glycomics
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- Software tool
GlycoMod
Possible oligosaccharide structures on proteins from masses-
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- Glycomics
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- Software tool
GlyConnect Compozitor
Contextualises glycan composition sets-
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- Proteins & Proteomes
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- Glycomics
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- Database
Glyco@Expasy
Zooming in on web-based glycoinformatics resources-
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- Systems Biology
- , Glycomics
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- Software tool
HMO-Glycologue
Simulator of Human Milk Oligosaccharide synthesis-
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- Glycomics
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- Database
GAG-DB
3D structures of glycosaminoglycans-
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- Proteins & Proteomes
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- Glycomics
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- Software tool
MzJava
Open source Java class library to process MS fragmentation-
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- Proteins & Proteomes
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- Glycomics
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- Database
UniLectin
Structural and functional classification of lectins-
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- Metabolomics
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- Software tool
MSight
Mass Spectrometry Imager-
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- Proteins & Proteomes
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- Software tool
Sulfinator
Predict tyrosine sulfation sites in protein sequences-
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- Proteins & Proteomes
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- Software tool
PeptideMass
Theoretical protein cleavage by a given enzyme-
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- Proteins & Proteomes
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- Software tool
Myristoylator
N-terminal myristoylation of proteins by neural networks-
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- Proteins & Proteomes
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- Software tool
FindPept
Unspecific protein cleavage from experimental masses-
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- Proteins & Proteomes
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- Software tool
FindMod
Potential PTMs and single amino acid substitutions-
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- Proteins & Proteomes
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- Database
VenomZone
Portal to venom protein UniProtKB entries-
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- Proteins & Proteomes
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- Database
UniProtKB/Swiss-Prot
Protein knowledgebase-
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- Proteins & Proteomes
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- Database
UniProtKB
Protein sequence database-
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- Proteins & Proteomes
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- Software tool
PRATT
Conserved patterns in a set of protein sequences-
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- Proteins & Proteomes
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- Software tool
HAMAP-Scan
Scanning of protein sequences against HAMAP families-
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- Proteins & Proteomes
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- Database
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- Software tool
HAMAP
UniProtKB family classification and annotation-
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- Proteins & Proteomes
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- Database
UniProt SPARQL endpoint
SPARQL access to UniProt and related data-
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- Proteins & Proteomes
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- Database
HAMAP SPARQL endpoint
SPARQL access to the HAMAP annotation rules-
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- Proteins & Proteomes
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- Database
PROSITE
Protein family and domain database-
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- Proteins & Proteomes
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- Software tool
ScanProsite
Protein sequences against PROSITE-
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- Proteins & Proteomes
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- Text mining & Machine learning
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- Database
MHC Motif Atlas
MHC Motif Atlas-